Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | DIZ28_11165 | Not Available | Positive | 2265798 - 2266067 | 10269.4 |
| polyribonucleotide nucleotidyltransferase | DIZ28_11170 | Not Available | Positive | 2266314 - 2268449 | 77119.6 |
| lipoprotein nlpi | DIZ28_11175 | Not Available | Positive | 2268558 - 2269442 | 33622.5 |
| protein yrbn | DIZ28_11180 | Not Available | Positive | 2269549 - 2269629 | 2979.59 |
| dead/deah family atp-dependent rna helicase | DIZ28_11185 | Not Available | Positive | 2269622 - 2271511 | 70594.6 |
| tryptophan-specific transporter | DIZ28_11190 | Not Available | Positive | 2271665 - 2272909 | 44365.2 |
| luciferase-like monooxygenase | DIZ28_11195 | Not Available | Negative | 2273026 - 2274033 | 37131.5 |
| u32 family peptidase | DIZ28_11200 | Not Available | Negative | 2274114 - 2274992 | 32537.1 |
| collagenase | DIZ28_11205 | Not Available | Negative | 2275001 - 2275996 | 37035.2 |
| scp2 domain-containing protein | DIZ28_11210 | Not Available | Positive | 2276205 - 2276729 | 19673.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





