Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | DIZ28_11065 | Not Available | Positive | 2244680 - 2245426 | 27191.5 |
| glutamine abc transporter permease | DIZ28_11070 | Not Available | Positive | 2245565 - 2246224 | 24365.8 |
| glutamine abc transporter atp-binding protein glnq | DIZ28_11075 | Not Available | Positive | 2246221 - 2246943 | 26733.6 |
| moderate conductance mechanosensitive channel ybio | DIZ28_11080 | Not Available | Positive | 2247204 - 2249429 | 81908.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DIZ28_11085 | Not Available | Negative | 2249426 - 2250457 | 38412.0 |
| duf1471 domain-containing protein | DIZ28_11090 | Not Available | Positive | 2250484 - 2250888 | 14655.7 |
| catecholate siderophore receptor fiu | DIZ28_11095 | Not Available | Positive | 2251153 - 2253435 | 81945.4 |
| pkhd-type hydroxylase | DIZ28_11100 | Not Available | Positive | 2253477 - 2254154 | 25530.2 |
| dksa/trar family c4-type zinc finger protein | DIZ28_11105 | Not Available | Positive | 2254228 - 2254494 | 9804.42 |
| duf1471 domain-containing protein | DIZ28_11110 | Not Available | Positive | 2254760 - 2255020 | 8568.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





