Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1479 domain-containing protein | DIZ28_11005 | Not Available | Positive | 2233624 - 2234889 | 47331.9 |
| abc-f family atpase | DIZ28_11010 | Not Available | Negative | 2235130 - 2236722 | 59861.4 |
| transpeptidase | DIZ28_11015 | Not Available | Positive | 2236941 - 2237861 | 33327.2 |
| anion transporter | DIZ28_11020 | Not Available | Negative | 2237920 - 2239038 | 41227.3 |
| transcriptional regulator mntr | DIZ28_11025 | Not Available | Negative | 2239035 - 2239502 | 17641.3 |
| manganase accumulation protein mnts | DIZ28_11030 | Not Available | Positive | 2239688 - 2239816 | 5031.31 |
| phosphoethanolamine transferase opge | DIZ28_11035 | Not Available | Positive | 2240088 - 2241671 | 59709.4 |
| outer membrane protein x | DIZ28_11040 | Not Available | Negative | 2241719 - 2242234 | 18603.6 |
| threonine/homoserine exporter rhta | DIZ28_11045 | Not Available | Positive | 2242587 - 2243474 | 31170.4 |
| dna starvation/stationary phase protection protein | DIZ28_11055 | Not Available | Positive | 2243773 - 2244276 | 18696.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





