Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | DIZ28_10905 | Not Available | Negative | 2209802 - 2211004 | 43643.4 |
| glutathione s-transferase | DIZ28_10910 | Not Available | Positive | 2211251 - 2211877 | 23714.4 |
| pqq-dependent sugar dehydrogenase | DIZ28_10915 | Not Available | Negative | 2211874 - 2212989 | 40987.6 |
| biofilm regulator bssr | DIZ28_10920 | Not Available | Negative | 2213100 - 2213483 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DIZ28_10925 | Not Available | Positive | 2213696 - 2215021 | 49584.6 |
| type ii toxin-antitoxin system rele/pare family toxin | DIZ28_10930 | Not Available | Positive | 2215247 - 2215633 | 14293.3 |
| transcriptional regulator | DIZ28_10935 | Not Available | Positive | 2215623 - 2215952 | 11982.8 |
| ggdef domain-containing protein | DIZ28_10940 | Not Available | Negative | 2216022 - 2217350 | 49893.8 |
| c-di-gmp phosphodiesterase | DIZ28_10945 | Not Available | Negative | 2217358 - 2219706 | 90088.7 |
| glutathione abc transporter permease | DIZ28_10950 | Not Available | Negative | 2219884 - 2220795 | 33254.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





