Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potf | DIZ28_10595 | Not Available | Positive | 2143433 - 2144545 | 40885.7 |
| polyamine abc transporter atp-binding protein | DIZ28_10600 | Not Available | Positive | 2144640 - 2145773 | 41981.4 |
| putrescine abc transporter permease poth | DIZ28_10605 | Not Available | Positive | 2145783 - 2146736 | 35457.6 |
| spermidine/putrescine abc transporter permease | DIZ28_10610 | Not Available | Positive | 2146733 - 2147578 | 30542.4 |
| duf2593 domain-containing protein | DIZ28_10615 | Not Available | Positive | 2147638 - 2148126 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | DIZ28_10620 | Not Available | Positive | 2148167 - 2149294 | 41842.1 |
| pts ascorbate transporter subunit iic | DIZ28_10625 | Not Available | Positive | 2149574 - 2150917 | 48523.6 |
| pts sugar transporter iib | DIZ28_10630 | Not Available | Positive | 2150939 - 2151259 | 11864.4 |
| sulfatase | DIZ28_10635 | Not Available | Positive | 2151271 - 2152752 | 57065.4 |
| arginine abc transporter substrate-binding protein | DIZ28_10640 | Not Available | Negative | 2152803 - 2153534 | 26847.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





