Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DIZ28_10545 | Not Available | Positive | 2135514 - 2136872 | 50335.1 |
| bifunctional nicotinamidase/pyrazinamidase | DIZ28_10550 | Not Available | Negative | 2136965 - 2137606 | 23340.2 |
| l-asparaginase 1 | DIZ28_10555 | Not Available | Negative | 2137617 - 2138633 | 37129.5 |
| signal peptide peptidase sppa | DIZ28_10560 | Not Available | Negative | 2138787 - 2140643 | 67204.9 |
| hypothetical protein | DIZ28_10565 | Not Available | Negative | 2140586 - 2140750 | 5866.05 |
| nad(p)h nitroreductase | DIZ28_10570 | Not Available | Positive | 2140804 - 2141227 | 15371.5 |
| nad(p)h nitroreductase | DIZ28_10575 | Not Available | Positive | 2141247 - 2141555 | 11987.3 |
| 30s ribosomal protein s6--l-glutamate ligase | DIZ28_10580 | Not Available | Positive | 2141616 - 2142518 | 32438.5 |
| ybjn domain-containing protein | DIZ28_10585 | Not Available | Positive | 2142606 - 2143082 | 17667.1 |
| putrescine/spermidine abc transporter substrate-binding protein | DIZ28_10590 | Not Available | Positive | 2143288 - 2143449 | 6387.65 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





