Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ28_10445 | Not Available | Positive | 2115259 - 2115411 | 5461.79 |
| ybak/prolyl-trna synthetase associated domain-containing protein | DIZ28_10450 | Not Available | Negative | 2115412 - 2115915 | 17865.7 |
| ggdef domain-containing protein | DIZ28_10455 | Not Available | Negative | 2115958 - 2117448 | 56591.9 |
| ggdef domain-containing protein | DIZ28_10460 | Not Available | Negative | 2117629 - 2119104 | 56104.7 |
| yeah/yhbh family protein | DIZ28_10465 | Not Available | Negative | 2119251 - 2120534 | 49483.2 |
| prka family serine protein kinase | DIZ28_10470 | Not Available | Negative | 2120647 - 2122581 | 74484.3 |
| mlta-interacting protein | DIZ28_10475 | Not Available | Positive | 2123017 - 2123763 | 27832.4 |
| aldo/keto reductase | DIZ28_10480 | Not Available | Positive | 2123853 - 2124707 | 30921.3 |
| d-hexose-6-phosphate mutarotase | DIZ28_10485 | Not Available | Negative | 2124758 - 2125642 | 32686.8 |
| aldehyde dehydrogenase | DIZ28_10490 | Not Available | Negative | 2125726 - 2126721 | 35534.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





