Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | DIZ28_10295 | Not Available | Positive | 2087687 - 2089243 | 56531.5 |
| cyclic diguanylate phosphodiesterase | DIZ28_10300 | Not Available | Negative | 2089247 - 2090845 | 59700.9 |
| l-serine ammonia-lyase | DIZ28_10305 | Not Available | Negative | 2090976 - 2092340 | 48881.4 |
| coenzyme a pyrophosphatase | DIZ28_10310 | Not Available | Negative | 2092524 - 2093102 | 21464.9 |
| aminodeoxychorismate synthase component 1 | DIZ28_10315 | Not Available | Negative | 2093106 - 2094467 | 51016.3 |
| yoah family protein | DIZ28_10320 | Not Available | Positive | 2094541 - 2094720 | 6554.7 |
| duf1889 domain-containing protein | DIZ28_10325 | Not Available | Negative | 2094840 - 2095199 | 13232.0 |
| hypothetical protein | DIZ28_10330 | Not Available | Negative | 2095561 - 2095905 | 12493.9 |
| atp-dependent dna helicase | DIZ28_10335 | Not Available | Positive | 2096037 - 2097947 | 70396.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DIZ28_10340 | Not Available | Positive | 2098005 - 2098700 | 25198.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





