Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf898 domain-containing protein | DIZ28_10035 | Not Available | Negative | 2039440 - 2040636 | 44908.1 |
| n-acetyltransferase | DIZ28_10040 | Not Available | Positive | 2040829 - 2041332 | 18593.5 |
| regulator of ribonuclease activity b | DIZ28_10045 | Not Available | Negative | 2041378 - 2041794 | 15603.5 |
| ornithine carbamoyltransferase | DIZ28_10050 | Not Available | Positive | 2041956 - 2042969 | 37206.5 |
| hypothetical protein | DIZ28_10055 | Not Available | Negative | 2043022 - 2044812 | 69121.2 |
| yhch/yjgk/yial family protein | DIZ28_10060 | Not Available | Negative | 2044935 - 2045387 | 16924.4 |
| tetr/acrr family transcriptional regulator | DIZ28_10065 | Not Available | Negative | 2045532 - 2046125 | 21399.6 |
| oxidoreductase | DIZ28_10070 | Not Available | Positive | 2046196 - 2046909 | 24590.6 |
| rida family protein | DIZ28_10075 | Not Available | Positive | 2047040 - 2047435 | 14575.1 |
| hypothetical protein | DIZ28_10080 | Not Available | Negative | 2047404 - 2047586 | 6871.37 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





