Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | DIZ28_08930 | Not Available | Positive | 1806469 - 1807452 | 36200.3 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DIZ28_08935 | Not Available | Positive | 1807428 - 1809038 | 59353.5 |
| thiamine import atp-binding protein thiq | DIZ28_08940 | Not Available | Positive | 1809022 - 1809720 | 25003.6 |
| deda family protein | DIZ28_08945 | Not Available | Negative | 1809834 - 1810598 | 28199.7 |
| arabinose operon regulatory protein | DIZ28_08950 | Not Available | Negative | 1810684 - 1811562 | 33385.8 |
| ribulokinase | DIZ28_08960 | Not Available | Positive | 1811900 - 1813600 | 61229.8 |
| l-arabinose isomerase | DIZ28_08965 | Not Available | Positive | 1813611 - 1815113 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | DIZ28_08970 | Not Available | Positive | 1815313 - 1816008 | 25533.4 |
| dna polymerase ii | DIZ28_08975 | Not Available | Positive | 1816083 - 1818434 | 90039.6 |
| rna polymerase-associated protein rapa | DIZ28_08980 | Not Available | Positive | 1818598 - 1821504 | 109775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





