Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | DIZ28_05900 | Not Available | Positive | 1209660 - 1211099 | 53252.4 |
| duf1480 domain-containing protein | DIZ28_05905 | Not Available | Positive | 1211216 - 1211452 | 8753.26 |
| duf1482 domain-containing protein | DIZ28_05910 | Not Available | Positive | 1211557 - 1211748 | 7324.62 |
| protein-serine/threonine phosphatase | DIZ28_05915 | Not Available | Negative | 1211749 - 1212405 | 25335.3 |
| duf2511 domain-containing protein | DIZ28_05920 | Not Available | Negative | 1212801 - 1213142 | 12393.2 |
| hypothetical protein | DIZ28_05925 | Not Available | Negative | 1213155 - 1214027 | 32514.3 |
| copc domain-containing protein yoba | DIZ28_05930 | Not Available | Negative | 1214031 - 1214405 | 13396.9 |
| dna polymerase iii subunit theta | DIZ28_05935 | Not Available | Positive | 1214544 - 1214774 | 8846.79 |
| carbon-nitrogen hydrolase family protein | DIZ28_05940 | Not Available | Positive | 1214876 - 1215532 | 24426.5 |
| exodeoxyribonuclease x | DIZ28_05945 | Not Available | Positive | 1215555 - 1216217 | 25138.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





