Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hypa | DIZ28_05190 | Not Available | Positive | 1081364 - 1081714 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | DIZ28_05195 | Not Available | Positive | 1081718 - 1082590 | 31579.8 |
| hydrogenase assembly protein hypc | DIZ28_05200 | Not Available | Positive | 1082581 - 1082853 | 9732.58 |
| hydrogenase formation protein hypd | DIZ28_05205 | Not Available | Positive | 1082853 - 1083974 | 41366.7 |
| hydrogenase expression/formation protein hype | DIZ28_05210 | Not Available | Positive | 1083971 - 1084981 | 35126.6 |
| formate hydrogenlyase transcriptional activator flha | DIZ28_05215 | Not Available | Positive | 1085055 - 1087133 | 78415.4 |
| nitrous oxide-stimulated promoter family protein | DIZ28_05220 | Not Available | Negative | 1087170 - 1087523 | 13904.1 |
| hypothetical protein | DIZ28_05225 | Not Available | Negative | 1087555 - 1087734 | 6752.81 |
| dna mismatch repair protein muts | DIZ28_05230 | Not Available | Positive | 1087810 - 1090371 | 95247.5 |
| protein-serine/threonine phosphatase | DIZ28_05235 | Not Available | Positive | 1090477 - 1091133 | 25083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





