Azospira oryzae

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Azospira

Description

Azospira oryzae is a microaerophilic bacterium, which means it thrives in environments with low levels of oxygen. This characteristic is significant for its ecological role, particularly in rice paddies, where it engages in nitrogen fixation, a crucial process for soil fertility and plant growth. Azospira oryzae has been identified as a symbiotic partner of Oryza sativa, commonly known as rice. This relationship enhances the nutritional quality of the rice plant, allowing it to utilize atmospheric nitrogen more efficiently, thus reducing the need for chemical fertilizers. The bacterium possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in specific ecological niches. The accession number QFOK00000000.1 provides a reference for researchers interested in studying its genetic makeup and functional capabilities. In summary, Azospira oryzae exemplifies the importance of microbial symbiosis in agriculture, particularly in rice cultivation. Its microaerophilic nature and association with Oryza sativa underscore its potential role in promoting sustainable agricultural practices by enhancing nitrogen availability in rice fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusAzospira
SpeciesAzospira oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Azospira oryzae isolate S2_009_000_R2_74

Gene Summary

Adenine Count

478322 bp

Thymine Count

474990 bp

Guanine Count

887731 bp

Cytosine Count

894904 bp

Genome Length

2736126 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDI596_00295Not AvailablePositive53146 - 5365519094.9
type i-u crispr-associated protein csx17DI596_00300Not AvailablePositive53652 - 5604287319.2
type i-u crispr-associated protein cas7DI596_00305Not AvailablePositive56054 - 563289938.1
succinyl-diaminopimelate desuccinylaseDI596_00310Not AvailablePositive56329 - 565638194.99
50s ribosomal protein l3 n(5)-glutamine methyltransferaseDI596_00315Not AvailablePositive56488 - 5746836444.5
hypothetical proteinDI596_00320Not AvailableNegative57473 - 5838133387.3
recombination protein recrDI596_00325Not AvailableNegative58381 - 5897722003.9
ybab/ebfc family nucleoid-associated proteinDI596_00330Not AvailableNegative59083 - 5940611532.2
dna polymerase iii subunit gamma/tauDI596_00335Not AvailableNegative59429 - 6100957151.8
acyloxyacyl hydrolaseDI596_00340Not AvailableNegative61017 - 6153218981.3

Displaying genes 61 – 70 of 3104 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.