Azospira oryzae

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Azospira

Description

Azospira oryzae is a microaerophilic bacterium, which means it thrives in environments with low levels of oxygen. This characteristic is significant for its ecological role, particularly in rice paddies, where it engages in nitrogen fixation, a crucial process for soil fertility and plant growth. Azospira oryzae has been identified as a symbiotic partner of Oryza sativa, commonly known as rice. This relationship enhances the nutritional quality of the rice plant, allowing it to utilize atmospheric nitrogen more efficiently, thus reducing the need for chemical fertilizers. The bacterium possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in specific ecological niches. The accession number QFOK00000000.1 provides a reference for researchers interested in studying its genetic makeup and functional capabilities. In summary, Azospira oryzae exemplifies the importance of microbial symbiosis in agriculture, particularly in rice cultivation. Its microaerophilic nature and association with Oryza sativa underscore its potential role in promoting sustainable agricultural practices by enhancing nitrogen availability in rice fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusAzospira
SpeciesAzospira oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Azospira oryzae isolate S2_009_000_R2_74

Gene Summary

Adenine Count

478322 bp

Thymine Count

474990 bp

Guanine Count

887731 bp

Cytosine Count

894904 bp

Genome Length

2736126 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridine nucleotide-disulfide oxidoreductaseDI596_13445Not AvailableNegative2370770 - 237261767758.6
hypothetical proteinDI596_13450Not AvailablePositive2372618 - 237304515492.2
c4-dicarboxylate abc transporterDI596_13455Not AvailablePositive2373042 - 237436446989.1
phytanoyl-coa dioxygenaseDI596_13460Not AvailableNegative2374466 - 23745854965.93
c4-dicarboxylate abc transporter permeaseDI596_13465Not AvailableNegative2374610 - 237593247222.6
c4-dicarboxylate abc transporter substrate-binding proteinDI596_13470Not AvailableNegative2375929 - 237630914428.9
6-carboxytetrahydropterin synthase quedDI596_13475Not AvailableNegative2376310 - 237666813385.0
radical sam proteinDI596_13480Not AvailablePositive2376741 - 237760131535.2
transcriptional regulatorDI596_13485Not AvailableNegative2377602 - 237791011748.3
methylcrotonoyl-coa carboxylaseDI596_13490Not AvailablePositive2378153 - 237869519664.8

Displaying genes 2611 – 2620 of 3104 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.