Azospira oryzae

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Azospira

Description

Azospira oryzae is a microaerophilic bacterium, which means it thrives in environments with low levels of oxygen. This characteristic is significant for its ecological role, particularly in rice paddies, where it engages in nitrogen fixation, a crucial process for soil fertility and plant growth. Azospira oryzae has been identified as a symbiotic partner of Oryza sativa, commonly known as rice. This relationship enhances the nutritional quality of the rice plant, allowing it to utilize atmospheric nitrogen more efficiently, thus reducing the need for chemical fertilizers. The bacterium possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in specific ecological niches. The accession number QFOK00000000.1 provides a reference for researchers interested in studying its genetic makeup and functional capabilities. In summary, Azospira oryzae exemplifies the importance of microbial symbiosis in agriculture, particularly in rice cultivation. Its microaerophilic nature and association with Oryza sativa underscore its potential role in promoting sustainable agricultural practices by enhancing nitrogen availability in rice fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusAzospira
SpeciesAzospira oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Azospira oryzae isolate S2_009_000_R2_74

Gene Summary

Adenine Count

478322 bp

Thymine Count

474990 bp

Guanine Count

887731 bp

Cytosine Count

894904 bp

Genome Length

2736126 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine--glyoxylate aminotransferaseDI596_11020Not AvailableNegative1976456 - 197737733917.9
phosphomannomutase/phosphoglucomutaseDI596_11025Not AvailablePositive1977378 - 197782016341.5
marc family proteinDI596_11030Not AvailableNegative1977879 - 197852022381.2
hypothetical proteinDI596_11035Not AvailableNegative1978537 - 197898916254.7
alanine--trna ligaseDI596_11040Not AvailableNegative1979233 - 197994924769.8
ubiquinone-binding proteinDI596_11045Not AvailableNegative1979950 - 198023111104.2
ssra-binding proteinDI596_11050Not AvailablePositive1980322 - 198076517217.1
c-type cytochrome biogenesis protein ccmiDI596_11055Not AvailableNegative1980884 - 198211942896.6
cytochrome c biogenesis protein ccmhDI596_11060Not AvailableNegative1982116 - 198251414777.9
hypothetical proteinDI596_11065Not AvailableNegative1982515 - 198348636316.9

Displaying genes 2141 – 2150 of 3104 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.