Azospira oryzae

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Rhodocyclaceae

Genus

Azospira

Description

Azospira oryzae is a microaerophilic bacterium, which means it thrives in environments with low levels of oxygen. This characteristic is significant for its ecological role, particularly in rice paddies, where it engages in nitrogen fixation, a crucial process for soil fertility and plant growth. Azospira oryzae has been identified as a symbiotic partner of Oryza sativa, commonly known as rice. This relationship enhances the nutritional quality of the rice plant, allowing it to utilize atmospheric nitrogen more efficiently, thus reducing the need for chemical fertilizers. The bacterium possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in specific ecological niches. The accession number QFOK00000000.1 provides a reference for researchers interested in studying its genetic makeup and functional capabilities. In summary, Azospira oryzae exemplifies the importance of microbial symbiosis in agriculture, particularly in rice cultivation. Its microaerophilic nature and association with Oryza sativa underscore its potential role in promoting sustainable agricultural practices by enhancing nitrogen availability in rice fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyRhodocyclaceae
GenusAzospira
SpeciesAzospira oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Azospira oryzae isolate S2_009_000_R2_74

Gene Summary

Adenine Count

478322 bp

Thymine Count

474990 bp

Guanine Count

887731 bp

Cytosine Count

894904 bp

Genome Length

2736126 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa ester lyaseDI596_10320Not AvailableNegative1865050 - 186604537276.6
malate dehydrogenaseDI596_10325Not AvailableNegative1866067 - 18662436438.64
hypothetical proteinDI596_10330Not AvailablePositive1866384 - 186772450733.2
duf1992 domain-containing proteinDI596_10335Not AvailableNegative1867831 - 186821114086.0
hypothetical proteinDI596_10340Not AvailableNegative1868263 - 18684878560.87
suf system fe-s cluster assembly regulatorDI596_10345Not AvailablePositive1868477 - 186893516255.0
hypothetical proteinDI596_10350Not AvailablePositive1869050 - 186953817902.6
adenosylcobinamide-gdp ribazoletransferaseDI596_10355Not AvailablePositive1869546 - 187027424876.0
duf3422 domain-containing proteinDI596_10360Not AvailableNegative1870338 - 187157946264.1
gmp synthase (glutamine-hydrolyzing)DI596_10365Not AvailableNegative1871847 - 187344258609.9

Displaying genes 2011 – 2020 of 3104 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.