Marinifilum breve strain JC075

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum breve strain JC075 is characterized by having a single replicon, which may indicate a streamlined genome organization typical for some marine bacteria. This strain is cataloged under the accession number QFLI00000000.1, providing a reference for its genetic sequence and further studies. As a member of the Marinifilum genus, M. breve is likely to be adapted to marine environments, showcasing traits that facilitate survival and growth in such ecosystems. The presence of a single replicon may suggest a potential efficiency in genomic replication and metabolic processes, allowing the organism to thrive in fluctuating conditions typical of marine habitats. In terms of ecological implications, the streamlined genetic architecture of Marinifilum breve JC075 could confer advantages in resource-limited environments, where rapid adaptation may be crucial for survival. Understanding the specific functions and capabilities of this strain could provide insights into its role within marine microbiomes, particularly in nutrient cycling and interactions with other microbial communities. Overall, the genomic structure of Marinifilum breve strain JC075 sets a foundation for further exploration of its ecological roles in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum breve
Strainstrain JC075

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum breve strain JC075 scaffold_288, whole genome shotgun

Gene Summary

Adenine Count

1806326 bp

Thymine Count

1799348 bp

Guanine Count

949095 bp

Cytosine Count

1059194 bp

Genome Length

5613963 bp

Protein-coding Genes

4575 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxinDF185_14410Not AvailablePositive3417799 - 341816113775.5
thioredoxinDF185_14415Not AvailablePositive3418268 - 341870516048.8
tonb-dependent receptorDF185_14420Not AvailablePositive3418983 - 342143392613.9
nicotinamide riboside transporter pnucDF185_14425Not AvailablePositive3421485 - 342207222858.6
thiamine diphosphokinaseDF185_14430Not AvailablePositive3422122 - 342273923453.2
hypothetical proteinDF185_14435Not AvailablePositive3423184 - 342445246952.1
hypothetical proteinDF185_14440Not AvailableNegative3424508 - 342637071234.5
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseDF185_14445Not AvailableNegative3426410 - 342783453602.2
exodeoxyribonuclease vii small subunitDF185_14450Not AvailableNegative3427827 - 34280277538.16
exodeoxyribonuclease vii large subunitDF185_14455Not AvailableNegative3428028 - 342941952849.2

Displaying genes 2881 – 2890 of 4672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.