Sphingosinicella humi strain QZX222

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Sphingosinicella humi strain QZX222 is characterized by having a single replicon, which is a significant trait for its genetic stability and replication efficiency. This strain is cataloged under the accession number QFFF00000000.1, indicating its availability in genomic databases for further research and analysis. The classification of Sphingosinicella humi indicates its belonging to the Sphingosinicella genus, which is known for its potential roles in environmental microbiology. Members of this genus are typically found in soil environments, suggesting that strain QZX222 may contribute to soil health and nutrient cycling processes. The presence of a single replicon in Sphingosinicella humi strain QZX222 may facilitate its adaptation to specific ecological niches, allowing it to thrive in various soil conditions. This adaptability could be crucial for its survival in fluctuating environments, and understanding its genomic characteristics can provide insights into its ecological functions. Overall, Sphingosinicella humi strain QZX222 exemplifies the intricate relationships within soil microbiomes, where single-replicon organisms can play unique roles in maintaining ecosystem balance and supporting plant growth through various soil interactions. Further research on this strain could enhance our understanding of soil microbiology and its implications for agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella humi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingosinicella humi strain QZX222 contig4, whole genome shotgun

Gene Summary

Adenine Count

516567 bp

Thymine Count

516701 bp

Guanine Count

994407 bp

Cytosine Count

998685 bp

Genome Length

3026360 bp

Protein-coding Genes

2883 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urca family proteinDF286_14740Not AvailableNegative2994974 - 299540515337.3
lysr family transcriptional regulatorDF286_14745Not AvailablePositive2995457 - 299637132827.4
phytanoyl-coa dioxygenaseDF286_14750Not AvailableNegative2996411 - 299728632842.7
glutamine--fructose-6-phosphate transaminase (isomerizing)DF286_14755Not AvailableNegative2997391 - 299921465732.1
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuDF286_14760Not AvailableNegative2999329 - 300068747655.3
phosphoglycolate phosphataseDF286_14765Not AvailablePositive3000765 - 300144823633.1
hydroxyacid dehydrogenaseDF286_14770Not AvailablePositive3001468 - 300252938102.3
hypothetical proteinDF286_14775Not AvailableNegative3002526 - 300353637859.2
hprk-related kinase aDF286_14780Not AvailableNegative3003533 - 300439630954.8
hpr-rel-a system pqqd family peptide chaperoneDF286_14785Not AvailableNegative3004393 - 300470411000.0

Displaying genes 2911 – 2920 of 2944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.