Sphingosinicella humi strain QZX222

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Sphingosinicella humi strain QZX222 is characterized by having a single replicon, which is a significant trait for its genetic stability and replication efficiency. This strain is cataloged under the accession number QFFF00000000.1, indicating its availability in genomic databases for further research and analysis. The classification of Sphingosinicella humi indicates its belonging to the Sphingosinicella genus, which is known for its potential roles in environmental microbiology. Members of this genus are typically found in soil environments, suggesting that strain QZX222 may contribute to soil health and nutrient cycling processes. The presence of a single replicon in Sphingosinicella humi strain QZX222 may facilitate its adaptation to specific ecological niches, allowing it to thrive in various soil conditions. This adaptability could be crucial for its survival in fluctuating environments, and understanding its genomic characteristics can provide insights into its ecological functions. Overall, Sphingosinicella humi strain QZX222 exemplifies the intricate relationships within soil microbiomes, where single-replicon organisms can play unique roles in maintaining ecosystem balance and supporting plant growth through various soil interactions. Further research on this strain could enhance our understanding of soil microbiology and its implications for agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella humi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingosinicella humi strain QZX222 contig4, whole genome shotgun

Gene Summary

Adenine Count

516567 bp

Thymine Count

516701 bp

Guanine Count

994407 bp

Cytosine Count

998685 bp

Genome Length

3026360 bp

Protein-coding Genes

2883 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3576 domain-containing proteinDF286_06125Not AvailablePositive1252273 - 125270715165.0
leucine--trna ligaseDF286_06130Not AvailablePositive1252730 - 125526493923.2
hypothetical proteinDF286_06135Not AvailablePositive1255261 - 125575217297.6
dna polymerase iii subunit deltaDF286_06140Not AvailablePositive1255749 - 125677435923.3
chromosome partitioning protein parbDF286_06145Not AvailableNegative1256788 - 125767832648.2
chromosome partitioning protein paraDF286_06150Not AvailableNegative1257675 - 125845728030.9
16s rrna (guanine(527)-n(7))-methyltransferase rsmgDF286_06155Not AvailableNegative1258454 - 125910124214.9
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDF286_06160Not AvailableNegative1259101 - 126096666759.7
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDF286_06165Not AvailableNegative1261031 - 126232345044.7
hypothetical proteinDF286_06170Not AvailableNegative1262320 - 12625508535.37

Displaying genes 1211 – 1220 of 2944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.