Pararhodobacter marinus strain CIC4N-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pararhodobacter

Description

Pararhodobacter marinus strain CIC4N-9 is characterized by having a single replicon, indicating a streamlined genetic organization. The strain is cataloged under the accession number QEYD00000000.1, which serves as a unique identifier for its genomic data in biological databases. This strain belongs to the genus Pararhodobacter, a group known for its ecological roles in marine environments. While specific metabolic pathways and ecological interactions have not been detailed here, the presence of Pararhodobacter species in marine ecosystems often suggests involvement in biogeochemical cycles, potentially contributing to nutrient cycling and organic matter degradation in coastal waters. The streamlined genomic structure of Pararhodobacter marinus strain CIC4N-9 may facilitate efficient adaptation to its marine habitat, allowing for survival and growth in dynamic environmental conditions. This adaptability underscores the ecological significance of this strain within its niche, although further studies are necessary to elucidate its specific roles and interactions within marine microbiomes. In summary, Pararhodobacter marinus strain CIC4N-9, with its single replicon and unique accession number, represents an important microbial entity likely contributing to the health and functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPararhodobacter
SpeciesPararhodobacter marinus
Strainstrain CIC4N-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pararhodobacter marinus strain CIC4N-9

Gene Summary

Adenine Count

743324 bp

Thymine Count

748484 bp

Guanine Count

1501785 bp

Cytosine Count

1492541 bp

Genome Length

4486134 bp

Protein-coding Genes

4148 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporter substrate-binding proteinC4N9_10000Not AvailablePositive2122677 - 212366634620.6
trap transporter small permeaseC4N9_10005Not AvailablePositive2123668 - 212417718124.9
c4-dicarboxylate abc transporter permeaseC4N9_10010Not AvailablePositive2124174 - 212547845687.9
alpha/beta hydrolaseC4N9_10015Not AvailablePositive2125478 - 212615825086.6
extradiol ring-cleavage dioxygenaseC4N9_10020Not AvailablePositive2126163 - 212652213206.9
protocatechuate 3,4-dioxygenaseC4N9_10025Not AvailablePositive2126515 - 212737832112.3
hypothetical proteinC4N9_10030Not AvailablePositive2127378 - 212769211278.4
5,10-methylenetetrahydrofolate reductaseC4N9_10035Not AvailablePositive2127706 - 212859932072.9
hypothetical proteinC4N9_10040Not AvailableNegative2128688 - 212978839344.8
signal peptidaseC4N9_10045Not AvailableNegative2130475 - 213147335556.8

Displaying genes 2101 – 2110 of 4274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.