Alcaligenes faecalis strain YBY

Gram-negativeRodAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Alcaligenes

Description

Alcaligenes faecalis strain YBY is a Gram-negative, rod-shaped bacterium primarily found in diverse environments, including fresh water, soil, and hospital settings. This strain exhibits an aerobic metabolism, indicating that it requires oxygen for growth and survival. Its presence in hospital environments suggests a potential role in both natural and artificial ecosystems, where it may interact with other microbial communities. The adaptability of A. faecalis strain YBY to various habitats—including aquatic environments and soil—highlights its ecological versatility. This organism's ability to thrive in hospital settings points to its potential significance in understanding microbial dynamics in these environments, where it may coexist with other microorganisms and contribute to the overall microbial landscape. Given its host-associated nature, further research into the interactions between A. faecalis strain YBY and other microbial species could provide insights into its ecological role and functional contributions in freshwater and hospital ecosystems. This adaptability underscores its potential importance in biogeochemical cycles and microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAlcaligenes
SpeciesAlcaligenes faecalis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Alcaligenes faecalis strain YBY
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; hospital environments; hospital settings; HostAssociated; soil; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Alcaligenes faecalis strain YBY

Accession NumberQEXO00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3809 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp2, phage terminase, large subunit, putativeDF183_14605Not Available+3190144 - 319186564165.7
Gp4, phage portal protein, hk97 familyDF183_14610Not Available+3192007 - 319324245797.7
Putative capsid assembly protein/proteaseDF183_14615Not Available+3193239 - 319418033468.7
Gp6, major capsid head proteinDF183_14620Not Available+3194242 - 319554346078.7
Gp8, conserved hypothetical proteinDF183_14625Not Available+3195749 - 319625818385.2
Head closure proteinDF183_14630Not Available+3196264 - 319662313055.5
Hypothetical proteinDF183_14635Not Available+3196643 - 319715218524.1
Hypothetical proteinDF183_14640Not Available+3197149 - 319751413799.8
Tail proteinDF183_14645Not Available+3197560 - 319821623118.3
Hypothetical proteinDF183_14650Not Available+3198225 - 319854511650.9

Displaying genes 1 – 10 of 3954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

273 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000327(3S,4R)-3,4-dihydrophenanthrene-3,4-diolC14H12O2Chemical structure of (3S,4R)-3,4-dihydrophenanthrene-3,4-diolNot available
Average212.248Da
Monoisotopic212.083729626Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 273 metabolites