Corticimicrobacter populi strain 3d-2-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Corticimicrobacter

Description

Corticimicrobacter populi strain 3d-2-2 is characterized by having a single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number QETA00000000.1, providing a reference for researchers interested in its genomic and functional analysis. Corticimicrobacter species are known to inhabit specific environments, particularly those associated with plant materials, suggesting an ecological role in the decomposition and cycling of organic matter. The presence of Corticimicrobacter populi strain 3d-2-2 in such habitats may imply its involvement in the microbiome of decaying wood or leaf litter, where it could contribute to nutrient recycling and the maintenance of soil health. Understanding the genomic features of Corticimicrobacter populi strain 3d-2-2 offers insights into its potential metabolic capabilities and ecological functions. The single replicon suggests a possible adaptation to its ecological niche, potentially allowing for efficient replication and resource utilization in the environments it occupies. Further research on this strain could elucidate its specific roles in ecosystem processes and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusCorticimicrobacter
SpeciesCorticimicrobacter populi
Strainstrain 3d-2-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corticimicrobacter populi strain 3d-2-2 Scaffold17, whole genome

Gene Summary

Adenine Count

680802 bp

Thymine Count

704282 bp

Guanine Count

1111896 bp

Cytosine Count

1055663 bp

Genome Length

3552643 bp

Protein-coding Genes

3196 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i poly(r)-hydroxyalkanoic acid synthaseDD235_00885Not AvailablePositive194913 - 19650259016.0
beta-ketoacyl-acp reductaseDD235_00890Not AvailablePositive196596 - 19733326300.2
polyhydroxyalkanoate synthesis repressor pharDD235_00895Not AvailablePositive197351 - 19791421292.8
duf1328 domain-containing proteinDD235_00900Not AvailableNegative197967 - 1981315837.54
choline transporterDD235_00905Not AvailablePositive198320 - 20029673243.7
2-nitropropane dioxygenaseDD235_00910Not AvailablePositive200454 - 20165343578.8
oxygen-independent coproporphyrinogen iii oxidaseDD235_00915Not AvailableNegative201806 - 20322753640.0
malate synthase gDD235_00920Not AvailableNegative203357 - 20553779505.5
lysr family transcriptional regulatorDD235_00925Not AvailablePositive205660 - 20655632765.5
cob(i)yrinic acid a,c-diamide adenosyltransferaseDD235_00930Not AvailablePositive206606 - 20717220436.5

Displaying genes 231 – 240 of 3300 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.