Corticimicrobacter populi strain 3d-2-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Corticimicrobacter

Description

Corticimicrobacter populi strain 3d-2-2 is characterized by having a single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number QETA00000000.1, providing a reference for researchers interested in its genomic and functional analysis. Corticimicrobacter species are known to inhabit specific environments, particularly those associated with plant materials, suggesting an ecological role in the decomposition and cycling of organic matter. The presence of Corticimicrobacter populi strain 3d-2-2 in such habitats may imply its involvement in the microbiome of decaying wood or leaf litter, where it could contribute to nutrient recycling and the maintenance of soil health. Understanding the genomic features of Corticimicrobacter populi strain 3d-2-2 offers insights into its potential metabolic capabilities and ecological functions. The single replicon suggests a possible adaptation to its ecological niche, potentially allowing for efficient replication and resource utilization in the environments it occupies. Further research on this strain could elucidate its specific roles in ecosystem processes and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusCorticimicrobacter
SpeciesCorticimicrobacter populi
Strainstrain 3d-2-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corticimicrobacter populi strain 3d-2-2 Scaffold17, whole genome

Gene Summary

Adenine Count

680802 bp

Thymine Count

704282 bp

Guanine Count

1111896 bp

Cytosine Count

1055663 bp

Genome Length

3552643 bp

Protein-coding Genes

3196 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4231 domain-containing proteinDD235_08310Not AvailableNegative1727593 - 172847433802.6
nucleaseDD235_08315Not AvailableNegative1728471 - 172888415818.0
integraseDD235_08320Not AvailableNegative1728946 - 173004041081.6
oligoribonucleaseDD235_08325Not AvailableNegative1730154 - 173069620809.1
peptidase m48DD235_08330Not AvailablePositive1730783 - 173205147503.6
ribosome small subunit-dependent gtpase aDD235_08335Not AvailablePositive1732048 - 173294132395.9
coa pyrophosphataseDD235_08340Not AvailableNegative1733075 - 173380326805.2
atpaseDD235_08345Not AvailableNegative1733835 - 173438920769.9
50s ribosomal protein l19DD235_08350Not AvailableNegative1734521 - 173489814198.3
hypothetical proteinDD235_08355Not AvailableNegative1735016 - 173548016615.3

Displaying genes 1641 – 1650 of 3300 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.