Amnibacterium flavum strain M8JJ-5

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Amnibacterium

Description

Amnibacterium flavum strain M8JJ-5 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain has been documented with a single replicon, indicating a relatively simple genomic structure. The strain is cataloged under the accession number QEOP00000000.1, which provides a unique identifier for its genomic data. The Gram-positive nature of Amnibacterium flavum suggests that it possesses a thick peptidoglycan layer in its cell wall, a trait commonly associated with this group of bacteria. This structural feature can influence various biological properties, such as resistance to certain antibiotics and the overall survival of the organism in various environments. The presence of a single replicon may indicate a streamlined genomic organization, which can be advantageous for rapid adaptation and efficient replication under specific ecological conditions. As Amnibacterium flavum strain M8JJ-5 is part of a broader microbial community, its traits may play a significant role in nutrient cycling and ecological interactions within its habitat. In summary, the characteristics of Amnibacterium flavum strain M8JJ-5 highlight its potential importance in microbial ecology, particularly in environments where Gram-positive bacteria contribute to the degradation of organic material and the maintenance of ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAmnibacterium
SpeciesAmnibacterium flavum
Strainstrain M8JJ-5

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amnibacterium flavum strain M8JJ-5 scaffold13, whole genome

Gene Summary

Adenine Count

555564 bp

Thymine Count

564092 bp

Guanine Count

1225563 bp

Cytosine Count

1224728 bp

Genome Length

3569947 bp

Protein-coding Genes

3308 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDDQ50_13420Not AvailableNegative2844533 - 284621258589.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseDDQ50_13425Not AvailableNegative2846212 - 284730939166.3
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseDDQ50_13430Not AvailableNegative2847294 - 284871549866.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDDQ50_13435Not AvailableNegative2848712 - 285026555340.1
penicillin-binding protein 2DDQ50_13440Not AvailableNegative2850351 - 285212062729.9
hypothetical proteinDDQ50_13445Not AvailableNegative2852135 - 285276721243.5
16s rrna (cytosine(1402)-n(4))-methyltransferaseDDQ50_13450Not AvailableNegative2852764 - 285376235881.0
cell division/cell wall cluster transcriptional repressor mrazDDQ50_13455Not AvailableNegative2853871 - 285431116215.1
hypothetical proteinDDQ50_13460Not AvailableNegative2854557 - 285492813520.5
geranylgeranyl pyrophosphate synthaseDDQ50_13465Not AvailablePositive2855067 - 285617940059.4

Displaying genes 2661 – 2670 of 3360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.