Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium flavum |
| Strain | strain M8JJ-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
555564 bp
Thymine Count
564092 bp
Guanine Count
1225563 bp
Cytosine Count
1224728 bp
Genome Length
3569947 bp
Protein-coding Genes
3308 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | DDQ50_11550 | Not Available | Positive | 2450465 - 2451667 | 41915.2 |
| shikimate kinase | DDQ50_11555 | Not Available | Positive | 2451660 - 2452172 | 17912.5 |
| 3-dehydroquinate synthase | DDQ50_11560 | Not Available | Positive | 2452169 - 2453254 | 38610.6 |
| hypothetical protein | DDQ50_11565 | Not Available | Positive | 2453395 - 2456088 | 90885.7 |
| type ii 3-dehydroquinate dehydratase | DDQ50_11570 | Not Available | Positive | 2456118 - 2456555 | 15491.4 |
| elongation factor p | DDQ50_11575 | Not Available | Positive | 2456645 - 2457208 | 20413.0 |
| transcription antitermination factor nusb | DDQ50_11580 | Not Available | Positive | 2457210 - 2457632 | 14850.5 |
| alkaline phosphatase | DDQ50_11585 | Not Available | Negative | 2457697 - 2459547 | 62640.3 |
| deoxyribose-phosphate aldolase | DDQ50_11590 | Not Available | Negative | 2459701 - 2460384 | 23073.6 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DDQ50_11595 | Not Available | Positive | 2460534 - 2461064 | 18782.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
