Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas vasicola |
| Strain | strain R5P |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
873002 bp
Thymine Count
869914 bp
Guanine Count
1504924 bp
Cytosine Count
1512838 bp
Genome Length
4760678 bp
Protein-coding Genes
3839 genes
Non-Coding Genes
233 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4236 domain-containing protein | DEG04_002300 | Not Available | Positive | 472769 - 473914 | 42210.7 |
| type iii secretion system effector protein | DEG04_002305 | Not Available | Negative | 473948 - 474589 | 23153.1 |
| hydrolase tatd | DEG04_002320 | Not Available | Negative | 475709 - 476521 | 30295.1 |
| lysr family transcriptional regulator | DEG04_002325 | Not Available | Negative | 476823 - 477740 | 33363.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | DEG04_002330 | Not Available | Positive | 477868 - 478920 | 38728.3 |
| oxidoreductase | DEG04_002335 | Not Available | Positive | 478917 - 479897 | 35374.3 |
| ncs2 family permease | DEG04_002340 | Not Available | Positive | 480267 - 481580 | 45363.7 |
| nucleoside hydrolase | DEG04_002350 | Not Available | Positive | 483400 - 484560 | 42426.6 |
| atze family amidohydrolase | DEG04_002355 | Not Available | Positive | 484989 - 486449 | 50322.9 |
| gamma-glutamyltransferase family protein | DEG04_002360 | Not Available | Positive | 486449 - 488029 | 55576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
