Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas vasicola |
| Strain | strain R5P |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
873002 bp
Thymine Count
869914 bp
Guanine Count
1504924 bp
Cytosine Count
1512838 bp
Genome Length
4760678 bp
Protein-coding Genes
3839 genes
Non-Coding Genes
233 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | DEG04_019005 | Not Available | Positive | 4071744 - 4072247 | 18877.6 |
| type vi secretion system baseplate subunit tssf | DEG04_019010 | Not Available | Positive | 4072251 - 4074128 | 69460.1 |
| type vi secretion system baseplate subunit tssg | DEG04_019015 | Not Available | Positive | 4074092 - 4075102 | 37096.6 |
| type vi secretion system atpase tssh | DEG04_019020 | Not Available | Positive | 4075134 - 4077839 | 98197.4 |
| hypothetical protein | DEG04_019025 | Not Available | Positive | 4078053 - 4078736 | 25428.8 |
| r body protein rebb-like protein | DEG04_019030 | Not Available | Positive | 4079666 - 4079995 | 11390.5 |
| hypothetical protein | DEG04_019035 | Not Available | Negative | 4080052 - 4080252 | 7082.27 |
| hypothetical protein | DEG04_019040 | Not Available | Negative | 4080316 - 4080615 | 11314.5 |
| type iii secretion system effector protein xopk | DEG04_019045 | Not Available | Positive | 4080868 - 4083414 | 89235.9 |
| beta-galactosidase | DEG04_019050 | Not Available | Negative | 4083464 - 4085302 | 67622.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
