Helicobacter pylori strain AFR58

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain AFR58 is a Gram-negative bacterium characterized by its spiral shape and solitary cell arrangement. This strain thrives optimally at a temperature of 37.0°C, indicating its adaptation to host-associated environments, likely within the gastric mucosa of mammals. As a microaerophilic organism, H. pylori strain AFR58 requires a low concentration of oxygen for growth, which aligns with the hypoxic conditions typically found in the stomach. The unique morphology of this strain, along with its specific oxygen requirements, suggests a specialized niche within the host's gastric environment, where it may play a significant role in the complex microbial community. Understanding the characteristics of H. pylori strain AFR58 can provide insights into its interactions with the host and potential implications for gastric health. Furthermore, the adaptation to microaerophilic conditions may influence its metabolic pathways and colonization strategies, highlighting the importance of environmental factors in shaping the biology of this strain.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain AFR58

Accession NumberQEHJ00000000.1

Gene Summary

Adenine Count

498393 bp

Thymine Count

508811 bp

Guanine Count

316388 bp

Cytosine Count

325184 bp

Genome Length

1648791 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinDD779_04345Not Available-871588 - 87212120789.6
Hypothetical proteinDD779_04350Not Available-872149 - 87290728408.0
Hypothetical proteinDD779_04355Not Available-872909 - 87345420857.9
Hypothetical proteinDD779_04360Not Available-873488 - 8737218796.99
Hypothetical proteinDD779_04365Not Available-873718 - 87471337721.6
Phage holin3 superfamily proteinDD779_04370Not Available-874715 - 87503812047.0
Hypothetical proteinDD779_04375Not Available-875272 - 8754697767.76
Putative terminaseDD779_04380Not Available-875537 - 87709360561.6
AttlNot AvailableNot Available+876511 - 876522Not Available
Putative phage portal proteinDD779_04385Not Available-877211 - 87902269768.4

Displaying genes 1 – 10 of 1557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites