Helicobacter pylori strain JDX15

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain JDX15 is a Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This microbe thrives optimally at a temperature of 37.0°C, which aligns with the typical human body temperature, suggesting it is well-adapted to a host-associated habitat. As a microaerophilic organism, H. pylori strain JDX15 requires reduced oxygen levels for growth, indicating a specialized niche within the gastric environment of its host, where oxygen concentrations are lower than in the atmosphere. The unique morphological and physiological traits of strain JDX15 enhance its ability to persist in the harsh conditions of the stomach, including the acidic pH and the presence of bile salts. Its adaptation to a microaerophilic lifestyle may also play a crucial role in its survival and colonization, as the bacterium can utilize specific metabolic pathways that enable it to thrive in such a setting. Understanding these traits provides insight into the ecological dynamics of H. pylori, particularly in relation to its interactions with gastric mucosa and host immune responses. The ability of strain JDX15 to maintain viability in a microaerobic environment emphasizes the intricate adaptations evolved by Helicobacter species to occupy specialized niches within their hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain JDX15

Accession NumberQEGK00000000.1

Gene Summary

Adenine Count

486988 bp

Thymine Count

493271 bp

Guanine Count

310315 bp

Cytosine Count

317126 bp

Genome Length

1607760 bp

Protein-coding Genes

1464 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+265 - 382Not Available
23s ribosomal rnaNot AvailableNot Available+619 - 3506Not Available
hypothetical proteinDD743_00005Not Available-1 - 81330660.7
16s ribosomal rnaNot AvailableNot Available+831 - 2338Not Available
pyruvate, water dikinaseDD743_00010Not Available-924 - 336291256.5
hypothetical proteinDD743_00015Not Available+3590 - 36883491.26
threonine--trna ligaseDD743_00020Not Available+3745 - 558370224.8
translation initiation factor if-3DD743_00025Not Available+5580 - 619123334.3
50s ribosomal protein l35DD743_00030Not Available+6172 - 63667300.19
50s ribosomal protein l20DD743_00035Not Available+6461 - 681114060.5

Displaying genes 1 – 10 of 1506 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites