Helicobacter pylori strain JGF25

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain JGF25 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spiral shape, categorized as spirilla. It is notable for its single-cell arrangement and the presence of flagella, which assists in its mobility, although it does not exhibit movement in a conventional sense. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. H. pylori JGF25 is primarily host-associated, with a diverse range of hosts including Homo sapiens, Gallus gallus, various Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. The bacterium establishes a free-living biotic relationship within the gastrointestinal tract of these hosts. The strain is linked to numerous health effects, particularly chronic gastric inflammation, gastric ulcers, and various forms of gastric cancer, such as adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. It has been implicated in a spectrum of gastrointestinal diseases, including peptic ulcer disease, functional dyspepsia, and atrophic gastritis. The presence of H. pylori JGF25 in human hosts signifies its potential pathogenicity, contributing to significant health complications, including chronic gastritis and gastric tumors. This highlights the ecological role of H. pylori not only as a commensal organism within the human gut but also as a major factor influencing gastric health and disease progression. The strain's ability to induce a range of inflammatory responses underscores its relevance in both clinical microbiology and gastroenterology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain JGF25

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain JGF25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain JGF25 scaffold_44, whole genome shotgun

Gene Summary

Adenine Count

491377 bp

Thymine Count

499046 bp

Guanine Count

313817 bp

Cytosine Count

319193 bp

Genome Length

1623437 bp

Protein-coding Genes

1470 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDD744_03900Not AvailablePositive771967 - 77325649345.9
outer membrane beta-barrel protein hofeDD744_03905Not AvailablePositive773350 - 77471751974.7
hypothetical proteinDD744_03910Not AvailableNegative774724 - 77525120043.0
Tmrna,resume consensus sequence (at 77): aataactgtaaacaacgcNot AvailableNot AvailablePositive775294 - 775679Not Available
outer membrane lipoprotein chaperone lolaDD744_03920Not AvailableNegative775745 - 77629921489.3
preprotein translocase subunit secaDD744_03925Not AvailablePositive776446 - 77904399060.2
hypothetical proteinDD744_03930Not AvailablePositive779033 - 78026545955.1
outer membrane beta-barrel protein hoffDD744_03935Not AvailablePositive780547 - 78204656946.2
cadmium-translocating p-type atpaseDD744_03945Not AvailableNegative783578 - 78563874781.4
fis family transcriptional regulatorDD744_03950Not AvailableNegative785663 - 78718357264.4

Displaying genes 741 – 750 of 1512 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total