Helicobacter pylori strain JGF25

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain JGF25 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spiral shape, categorized as spirilla. It is notable for its single-cell arrangement and the presence of flagella, which assists in its mobility, although it does not exhibit movement in a conventional sense. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. H. pylori JGF25 is primarily host-associated, with a diverse range of hosts including Homo sapiens, Gallus gallus, various Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. The bacterium establishes a free-living biotic relationship within the gastrointestinal tract of these hosts. The strain is linked to numerous health effects, particularly chronic gastric inflammation, gastric ulcers, and various forms of gastric cancer, such as adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. It has been implicated in a spectrum of gastrointestinal diseases, including peptic ulcer disease, functional dyspepsia, and atrophic gastritis. The presence of H. pylori JGF25 in human hosts signifies its potential pathogenicity, contributing to significant health complications, including chronic gastritis and gastric tumors. This highlights the ecological role of H. pylori not only as a commensal organism within the human gut but also as a major factor influencing gastric health and disease progression. The strain's ability to induce a range of inflammatory responses underscores its relevance in both clinical microbiology and gastroenterology.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain JGF25

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain JGF25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain JGF25 scaffold_44, whole genome shotgun

Gene Summary

Adenine Count

491377 bp

Thymine Count

499046 bp

Guanine Count

313817 bp

Cytosine Count

319193 bp

Genome Length

1623437 bp

Protein-coding Genes

1470 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-8-phosphooctulonate synthaseDD744_00145Not AvailableNegative23362 - 2419230307.6
carbonic anhydraseDD744_00150Not AvailableNegative24179 - 2484425895.9
orotidine-5'-phosphate decarboxylaseDD744_00155Not AvailablePositive24964 - 2564725281.2
pantoate--beta-alanine ligaseDD744_00160Not AvailablePositive25648 - 2647831130.0
Trna-gluNot AvailableNot AvailablePositive26492 - 26567Not Available
Trna-aspNot AvailableNot AvailablePositive26631 - 26707Not Available
Trna-valNot AvailableNot AvailablePositive26748 - 26823Not Available
Trna-gluNot AvailableNot AvailablePositive26865 - 26939Not Available
Trna-lysNot AvailableNot AvailablePositive26950 - 27025Not Available
hypothetical proteinDD744_00190Not AvailableNegative27515 - 2951572765.4

Displaying genes 31 – 40 of 1512 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total