Microbacterium sp. TPD7012

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. TPD7012 is characterized as a rod-shaped bacterium and possesses a single replicon. This organism is cataloged under the accession number QDFV00000000.1. The morphology of Microbacterium sp. TPD7012, being rod-shaped, is typical of many actinobacteria, which are known for their diverse ecological roles and adaptations. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its metabolic efficiency and adaptability in various environments. Microbacterium species are often isolated from soil, water, and plant materials, suggesting that Microbacterium sp. TPD7012 may play a role in nutrient cycling within its ecosystem. The ecological implications of its existence could include participation in the breakdown of organic matter or interactions with other microorganisms, which are critical for maintaining soil health and fertility. Overall, the basic traits of Microbacterium sp. TPD7012 highlight its potential significance in ecological processes, particularly in environments where microbial communities contribute to the cycling of nutrients and organic materials. Further research could elucidate its specific functions and interactions within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. TPD7012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. TPD7012 Contig_3281, whole genome shotgun

Gene Summary

Adenine Count

628581 bp

Thymine Count

629187 bp

Guanine Count

1413407 bp

Cytosine Count

1411109 bp

Genome Length

4082313 bp

Protein-coding Genes

3854 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinDC434_17435Not AvailableNegative3585226 - 358607731356.2
abc transporter permeaseDC434_17440Not AvailableNegative3586074 - 358706035020.4
peptide abc transporter permeaseDC434_17445Not AvailableNegative3587053 - 358804836509.0
peptide abc transporter substrate-binding proteinDC434_17450Not AvailableNegative3588081 - 358977260212.7
nudix hydrolaseDC434_17455Not AvailablePositive3590038 - 359075426381.3
quinolinate synthaseDC434_17460Not AvailablePositive3590751 - 359208847902.9
l-aspartate oxidaseDC434_17465Not AvailablePositive3592085 - 359362052126.2
carboxylating nicotinate-nucleotide diphosphorylaseDC434_17470Not AvailablePositive3593620 - 359447129294.6
cysteine desulfuraseDC434_17475Not AvailablePositive3594477 - 359561338636.9
glycosyl transferaseDC434_17480Not AvailablePositive3595663 - 359658332977.0

Displaying genes 3441 – 3450 of 3929 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.