Microbacterium sp. TPD7012

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. TPD7012 is characterized as a rod-shaped bacterium and possesses a single replicon. This organism is cataloged under the accession number QDFV00000000.1. The morphology of Microbacterium sp. TPD7012, being rod-shaped, is typical of many actinobacteria, which are known for their diverse ecological roles and adaptations. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its metabolic efficiency and adaptability in various environments. Microbacterium species are often isolated from soil, water, and plant materials, suggesting that Microbacterium sp. TPD7012 may play a role in nutrient cycling within its ecosystem. The ecological implications of its existence could include participation in the breakdown of organic matter or interactions with other microorganisms, which are critical for maintaining soil health and fertility. Overall, the basic traits of Microbacterium sp. TPD7012 highlight its potential significance in ecological processes, particularly in environments where microbial communities contribute to the cycling of nutrients and organic materials. Further research could elucidate its specific functions and interactions within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. TPD7012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. TPD7012 Contig_3281, whole genome shotgun

Gene Summary

Adenine Count

628581 bp

Thymine Count

629187 bp

Guanine Count

1413407 bp

Cytosine Count

1411109 bp

Genome Length

4082313 bp

Protein-coding Genes

3854 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cina family proteinDC434_12245Not AvailableNegative2554454 - 255497517431.4
hypothetical proteinDC434_12255Not AvailableNegative2555676 - 255601112400.7
atp-dependent dna ligaseDC434_12260Not AvailablePositive2556087 - 255643412307.5
nad(p)-dependent dehydrogenaseDC434_12265Not AvailablePositive2556565 - 255744930676.8
eama family transporterDC434_12270Not AvailablePositive2557509 - 255842631501.9
preprotein translocase yidcDC434_12275Not AvailableNegative2558429 - 255918727011.7
hypothetical proteinDC434_12280Not AvailableNegative2559251 - 25595239066.17
2-nitropropane dioxygenaseDC434_12285Not AvailablePositive2559617 - 256066336160.9
type ii toxin-antitoxin system prevent-host-death family antitoxinDC434_12290Not AvailablePositive2560702 - 25609599433.2
vapc toxin family pin domain ribonucleaseDC434_12295Not AvailablePositive2560956 - 256135114260.2

Displaying genes 2471 – 2480 of 3929 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.