Microbacterium sp. TPD7012

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. TPD7012 is characterized as a rod-shaped bacterium and possesses a single replicon. This organism is cataloged under the accession number QDFV00000000.1. The morphology of Microbacterium sp. TPD7012, being rod-shaped, is typical of many actinobacteria, which are known for their diverse ecological roles and adaptations. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its metabolic efficiency and adaptability in various environments. Microbacterium species are often isolated from soil, water, and plant materials, suggesting that Microbacterium sp. TPD7012 may play a role in nutrient cycling within its ecosystem. The ecological implications of its existence could include participation in the breakdown of organic matter or interactions with other microorganisms, which are critical for maintaining soil health and fertility. Overall, the basic traits of Microbacterium sp. TPD7012 highlight its potential significance in ecological processes, particularly in environments where microbial communities contribute to the cycling of nutrients and organic materials. Further research could elucidate its specific functions and interactions within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. TPD7012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. TPD7012 Contig_3281, whole genome shotgun

Gene Summary

Adenine Count

628581 bp

Thymine Count

629187 bp

Guanine Count

1413407 bp

Cytosine Count

1411109 bp

Genome Length

4082313 bp

Protein-coding Genes

3854 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit yajcDC434_08715Not AvailablePositive1845933 - 184632814465.4
protein translocase subunit secdDC434_08720Not AvailablePositive1846384 - 184815062056.7
protein translocase subunit secfDC434_08725Not AvailablePositive1848150 - 184913935396.7
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDC434_08730Not AvailablePositive1849209 - 185146182988.4
hypothetical proteinDC434_08735Not AvailableNegative1851448 - 185211023608.6
duf349 domain-containing proteinDC434_08740Not AvailableNegative1852064 - 185335647031.0
nitrite reductase (nad(p)h)DC434_08745Not AvailablePositive1853663 - 185621291143.7
nitrite reductase (nad(p)h) small subunitDC434_08750Not AvailablePositive1856209 - 185658912980.5
uroporphyrinogen-iii c-methyltransferaseDC434_08755Not AvailablePositive1856586 - 185740127905.8
uroporphyrinogen-iii synthaseDC434_08760Not AvailablePositive1857398 - 185852539145.7

Displaying genes 1771 – 1780 of 3929 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.