Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase | DC415_04505 | Not Available | Negative | 959002 - 960486 | 54101.7 |
| sugar abc transporter atp-binding protein | DC415_04510 | Not Available | Negative | 960583 - 961587 | 36310.1 |
| sugar abc transporter permease | DC415_04515 | Not Available | Negative | 961599 - 962423 | 30391.1 |
| sugar abc transporter permease | DC415_04520 | Not Available | Negative | 962435 - 963307 | 32177.3 |
| sugar abc transporter substrate-binding protein | DC415_04525 | Not Available | Negative | 963428 - 964741 | 47809.7 |
| dna-binding transcriptional regulator | DC415_04530 | Not Available | Negative | 964883 - 965836 | 33697.6 |
| glutathione abc transporter atp-binding protein gsia | DC415_04535 | Not Available | Negative | 965941 - 967791 | 67788.7 |
| amidase | DC415_04540 | Not Available | Negative | 967920 - 969317 | 50379.0 |
| peptide abc transporter permease | DC415_04545 | Not Available | Negative | 969372 - 970190 | 28756.3 |
| peptide abc transporter | DC415_04550 | Not Available | Negative | 970190 - 971140 | 33656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


