Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | DC415_04405 | Not Available | Negative | 934918 - 935745 | 29683.4 |
| abc transporter substrate-binding protein | DC415_04410 | Not Available | Negative | 935832 - 936854 | 37198.8 |
| laci family transcriptional regulator | DC415_04415 | Not Available | Negative | 936851 - 937918 | 36958.1 |
| flavin reductase | DC415_04420 | Not Available | Positive | 938206 - 938727 | 18541.1 |
| rrf2 family transcriptional regulator | DC415_04425 | Not Available | Negative | 938758 - 939201 | 15755.1 |
| cellulose synthase | DC415_04430 | Not Available | Negative | 939352 - 941616 | 81154.5 |
| endoglucanase | DC415_04435 | Not Available | Negative | 941613 - 942659 | 37565.0 |
| cellulose synthase bcsb subunit | DC415_04440 | Not Available | Negative | 942659 - 945175 | 89004.1 |
| cellulose synthase catalytic subunit (udp-forming) | DC415_04445 | Not Available | Negative | 945175 - 947367 | 81999.8 |
| cellulose biosynthesis protein bcsn | DC415_04450 | Not Available | Negative | 947477 - 948358 | 30937.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


