Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | DC415_04355 | Not Available | Positive | 922919 - 925414 | 92449.6 |
| ku protein | DC415_04360 | Not Available | Negative | 925450 - 926232 | 29316.4 |
| phosphoribosyltransferase | DC415_04365 | Not Available | Negative | 926309 - 926977 | 24502.8 |
| amidohydrolase | DC415_04370 | Not Available | Positive | 927128 - 928300 | 41321.0 |
| nucleoside-diphosphate sugar epimerase | DC415_04375 | Not Available | Negative | 928558 - 929493 | 34635.3 |
| arac family transcriptional regulator | DC415_04380 | Not Available | Positive | 929568 - 930383 | 29756.2 |
| adenine deaminase | DC415_04385 | Not Available | Negative | 930418 - 932199 | 62613.1 |
| nucleoside hydrolase | DC415_04390 | Not Available | Negative | 932196 - 933122 | 32462.9 |
| abc transporter atp-binding protein | DC415_04395 | Not Available | Negative | 933124 - 934149 | 36449.2 |
| spermidine/putrescine abc transporter atp-binding protein | DC415_04400 | Not Available | Negative | 934142 - 934921 | 27880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


