Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal kinase | DC415_04255 | Not Available | Positive | 895675 - 896550 | 31268.0 |
| carbonic anhydrase | DC415_04260 | Not Available | Positive | 896617 - 897258 | 23694.2 |
| lytic transglycosylase | DC415_04265 | Not Available | Negative | 897383 - 898198 | 28811.2 |
| aspartate-semialdehyde dehydrogenase | DC415_04270 | Not Available | Negative | 898464 - 899498 | 37526.9 |
| aaa family atpase | DC415_04275 | Not Available | Positive | 900026 - 901558 | 53422.0 |
| cupin | DC415_04280 | Not Available | Positive | 901805 - 902311 | 18843.9 |
| penicillin-binding protein 1c | DC415_04285 | Not Available | Negative | 902402 - 904483 | 75127.1 |
| hypothetical protein | DC415_04290 | Not Available | Negative | 904483 - 909921 | 195373.0 |
| gnat family n-acetyltransferase | DC415_04295 | Not Available | Negative | 909968 - 910531 | 21841.4 |
| hypothetical protein | DC415_04300 | Not Available | Positive | 910609 - 911511 | 32210.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


