Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase | DC415_04205 | Not Available | Negative | 885458 - 886789 | 49182.6 |
| marr family transcriptional regulator | DC415_04210 | Not Available | Negative | 887096 - 887608 | 19493.4 |
| hypothetical protein | DC415_04215 | Not Available | Negative | 887839 - 888276 | 16229.0 |
| porphobilinogen synthase | DC415_04220 | Not Available | Positive | 888612 - 889625 | 36671.1 |
| rdd family protein | DC415_04225 | Not Available | Positive | 889690 - 890148 | 16975.4 |
| arginyltransferase | DC415_04230 | Not Available | Positive | 890285 - 891043 | 28708.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | DC415_04235 | Not Available | Positive | 891104 - 891325 | 8276.1 |
| type ii toxin-antitoxin system death-on-curing family toxin | DC415_04240 | Not Available | Positive | 891322 - 891717 | 14402.3 |
| dna topoisomerase iv subunit a | DC415_04245 | Not Available | Negative | 891763 - 894018 | 83073.5 |
| hypothetical protein | DC415_04250 | Not Available | Positive | 894244 - 895434 | 41758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


