Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | DC415_00120 | Not Available | Negative | 20816 - 22273 | 54192.3 |
| slc13 family permease | DC415_00125 | Not Available | Negative | 22490 - 24262 | 63023.8 |
| terc family protein | DC415_00130 | Not Available | Negative | 24528 - 25280 | 27252.4 |
| tetr/acrr family transcriptional regulator | DC415_00135 | Not Available | Negative | 25439 - 26110 | 24963.7 |
| hlyd family secretion protein | DC415_00140 | Not Available | Positive | 26256 - 27482 | 43090.8 |
| mfs transporter | DC415_00145 | Not Available | Positive | 27516 - 29099 | 57113.4 |
| hypothetical protein | DC415_00150 | Not Available | Negative | 29180 - 29776 | 22024.9 |
| dna-binding transcriptional regulator | DC415_00155 | Not Available | Positive | 29861 - 30541 | 25547.0 |
| laci family transcriptional regulator | DC415_00160 | Not Available | Positive | 30650 - 31672 | 36533.8 |
| xylulokinase | DC415_00165 | Not Available | Positive | 31754 - 33208 | 50590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


