Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_04105 | Not Available | Negative | 862388 - 862753 | 12755.1 |
| methyltransferase | DC415_04110 | Not Available | Negative | 863015 - 864058 | 38486.6 |
| ggdef-domain containing protein | DC415_04115 | Not Available | Positive | 864371 - 866353 | 74138.3 |
| dna translocase ftsk | DC415_04120 | Not Available | Negative | 866517 - 869240 | 98678.3 |
| dihydrodipicolinate synthase family protein | DC415_04125 | Not Available | Positive | 869554 - 870438 | 31125.5 |
| gntr family transcriptional regulator | DC415_04130 | Not Available | Positive | 870451 - 871110 | 24570.5 |
| abc transporter substrate-binding protein | DC415_04135 | Not Available | Positive | 871165 - 872493 | 47594.0 |
| abc transporter permease | DC415_04140 | Not Available | Positive | 872493 - 873431 | 35057.4 |
| sugar abc transporter permease | DC415_04145 | Not Available | Positive | 873407 - 874252 | 31085.1 |
| abc transporter atp-binding protein | DC415_04150 | Not Available | Positive | 874296 - 875354 | 38660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


