Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine utilization protein c | DC415_04055 | Not Available | Negative | 851290 - 851679 | 13856.6 |
| pyrimidine utilization protein b | DC415_04060 | Not Available | Negative | 851698 - 852435 | 26732.6 |
| pyrimidine utilization protein a | DC415_04065 | Not Available | Negative | 852432 - 853523 | 39894.6 |
| malto-oligosyltrehalose trehalohydrolase | DC415_04070 | Not Available | Negative | 853896 - 855677 | 67022.4 |
| hypothetical protein | DC415_04075 | Not Available | Negative | 855707 - 855925 | 8300.01 |
| malto-oligosyltrehalose synthase | DC415_04080 | Not Available | Positive | 855924 - 858452 | 93105.2 |
| hypothetical protein | DC415_04085 | Not Available | Positive | 858449 - 858658 | 7729.22 |
| mfs transporter | DC415_04090 | Not Available | Positive | 858646 - 859845 | 42620.0 |
| 2-keto-4-pentenoate hydratase | DC415_04095 | Not Available | Positive | 860323 - 861117 | 28209.1 |
| (s)-ureidoglycine aminohydrolase | DC415_04100 | Not Available | Negative | 861373 - 862197 | 30992.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


