Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DC415_03700 | Not Available | Negative | 776568 - 777239 | 24882.1 |
| pyridoxine 5'-phosphate synthase | DC415_03705 | Not Available | Positive | 777580 - 778335 | 27575.6 |
| fad-dependent oxidoreductase | DC415_03710 | Not Available | Positive | 778418 - 779704 | 46928.8 |
| hydroxyacid dehydrogenase | DC415_03715 | Not Available | Negative | 779767 - 780813 | 37383.8 |
| arac family transcriptional regulator | DC415_03720 | Not Available | Positive | 781000 - 781914 | 33490.3 |
| nad(p)-dependent oxidoreductase | DC415_03725 | Not Available | Negative | 781966 - 782853 | 30744.6 |
| transcriptional regulator | DC415_03730 | Not Available | Positive | 782964 - 783392 | 15908.1 |
| tetr family transcriptional regulator | DC415_03735 | Not Available | Positive | 783548 - 784201 | 23885.7 |
| ketol-acid reductoisomerase | DC415_03740 | Not Available | Positive | 784246 - 785265 | 36657.2 |
| hypothetical protein | DC415_03745 | Not Available | Positive | 785400 - 785597 | 7326.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


