Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone djla | DC415_03300 | Not Available | Positive | 686510 - 687247 | 27413.9 |
| n-acetylmuramoyl-l-alanine amidase | DC415_03305 | Not Available | Positive | 687244 - 688011 | 27781.8 |
| lytic transglycosylase | DC415_03310 | Not Available | Positive | 688259 - 688795 | 19425.8 |
| fad-dependent oxidoreductase | DC415_03315 | Not Available | Positive | 688973 - 690160 | 42557.5 |
| fad-dependent oxidoreductase | DC415_03320 | Not Available | Positive | 690257 - 691447 | 42646.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 691535 - 691938 | Not Available |
| transcriptional regulator mraz | DC415_03330 | Not Available | Positive | 692328 - 692768 | 16203.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DC415_03335 | Not Available | Positive | 692783 - 693808 | 36288.8 |
| hypothetical protein | DC415_03340 | Not Available | Positive | 693810 - 694373 | 19871.2 |
| penicillin-binding protein 2 | DC415_03345 | Not Available | Positive | 694373 - 696112 | 62677.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


