Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | DC415_03250 | Not Available | Negative | 675227 - 675697 | 17632.0 |
| arsr family transcriptional regulator | DC415_03255 | Not Available | Positive | 675996 - 677009 | 37167.7 |
| methylenetetrahydrofolate reductase | DC415_03260 | Not Available | Positive | 677011 - 677907 | 33031.1 |
| lytic murein transglycosylase | DC415_03265 | Not Available | Negative | 678331 - 679557 | 44360.8 |
| glycoside hydrolase | DC415_03270 | Not Available | Negative | 679795 - 680586 | 30063.2 |
| sam-dependent methyltransferase | DC415_03275 | Not Available | Negative | 680742 - 681365 | 23557.6 |
| duf3419 domain-containing protein | DC415_03280 | Not Available | Negative | 681416 - 682666 | 46834.9 |
| lytic transglycosylase | DC415_03285 | Not Available | Negative | 682873 - 683988 | 37838.9 |
| lysine transporter lyse | DC415_03290 | Not Available | Negative | 684110 - 684745 | 22936.4 |
| pyrophosphate--fructose-6-phosphate 1-phosphotransferase | DC415_03295 | Not Available | Negative | 684986 - 686197 | 43183.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


