Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_03200 | Not Available | Negative | 662546 - 664003 | 53028.1 |
| duf4432 domain-containing protein | DC415_03205 | Not Available | Positive | 664216 - 665052 | 30270.7 |
| tigr01244 family phosphatase | DC415_03210 | Not Available | Positive | 665177 - 665515 | 12430.7 |
| hypothetical protein | DC415_03215 | Not Available | Positive | 665559 - 665900 | 12029.4 |
| pyridoxamine 5-phosphate oxidase | DC415_03220 | Not Available | Negative | 666005 - 666769 | 27234.7 |
| thiamine pyrophosphate-binding protein | DC415_03225 | Not Available | Negative | 666920 - 668584 | 60564.4 |
| coa transferase | DC415_03230 | Not Available | Negative | 668581 - 669786 | 43619.2 |
| alpha/beta hydrolase | DC415_03235 | Not Available | Negative | 669859 - 670824 | 35742.6 |
| energy-dependent translational throttle protein etta | DC415_03240 | Not Available | Positive | 670941 - 672590 | 60776.4 |
| methyl-accepting chemotaxis protein | DC415_03245 | Not Available | Positive | 672806 - 675148 | 82523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


