Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DC415_03000 | Not Available | Positive | 612361 - 613764 | 49213.7 |
| carbamoyl-phosphate synthase small subunit | DC415_03005 | Not Available | Negative | 613823 - 615028 | 43000.1 |
| glutamyl-trna amidotransferase | DC415_03010 | Not Available | Positive | 615355 - 615807 | 16675.3 |
| dna primase | DC415_03015 | Not Available | Positive | 616208 - 618193 | 73610.5 |
| rna polymerase sigma factor rpod | DC415_03020 | Not Available | Positive | 618688 - 620742 | 77448.9 |
| hypothetical protein | DC415_03025 | Not Available | Positive | 620858 - 621859 | 36085.0 |
| signal transduction histidine kinase | DC415_03030 | Not Available | Negative | 622066 - 624618 | 94173.1 |
| secondary thiamine-phosphate synthase | DC415_03035 | Not Available | Positive | 624917 - 625339 | 15775.0 |
| hypothetical protein | DC415_03040 | Not Available | Positive | 625469 - 625813 | 12349.9 |
| hypothetical protein | DC415_03045 | Not Available | Negative | 625941 - 626675 | 25743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


