Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | DC415_02950 | Not Available | Positive | 596339 - 597790 | 54542.6 |
| hypothetical protein | DC415_02955 | Not Available | Positive | 597990 - 598775 | 27239.3 |
| carbamoyl phosphate synthase large subunit | DC415_02960 | Not Available | Negative | 598866 - 602351 | 125521.0 |
| glutathione s-transferase | DC415_02965 | Not Available | Positive | 602611 - 603279 | 25078.5 |
| flagellar biosynthesis protein flgm | DC415_02970 | Not Available | Positive | 603354 - 604253 | 32336.6 |
| duf2309 domain-containing protein | DC415_02975 | Not Available | Negative | 604321 - 606735 | 86696.2 |
| oxidoreductase | DC415_02980 | Not Available | Negative | 606741 - 608324 | 55351.5 |
| lysr family transcriptional regulator | DC415_02985 | Not Available | Positive | 608450 - 609325 | 32159.1 |
| duf2938 domain-containing protein | DC415_02990 | Not Available | Negative | 609322 - 609801 | 17264.5 |
| chemotaxis protein | DC415_02995 | Not Available | Negative | 609955 - 612042 | 73831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


