Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_02900 | Not Available | Positive | 586194 - 587042 | 33342.5 |
| gdp-fucose synthetase | DC415_02905 | Not Available | Negative | 587113 - 588048 | 34560.7 |
| gdp-mannose 4,6-dehydratase | DC415_02910 | Not Available | Negative | 588051 - 589121 | 40301.9 |
| hypothetical protein | DC415_02915 | Not Available | Positive | 589356 - 590168 | 30396.7 |
| glycosyltransferase | DC415_02920 | Not Available | Positive | 590319 - 591353 | 39049.1 |
| hypothetical protein | DC415_02925 | Not Available | Positive | 591364 - 592155 | 29618.5 |
| glycosyltransferase | DC415_02930 | Not Available | Positive | 592208 - 593251 | 39376.0 |
| glycosyl transferase family 1 | DC415_02935 | Not Available | Negative | 593328 - 594461 | 41909.5 |
| transcription elongation factor grea | DC415_02940 | Not Available | Negative | 594409 - 594885 | 17538.5 |
| putative dna modification/repair radical sam protein | DC415_02945 | Not Available | Positive | 595107 - 596339 | 45717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


