Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DC415_02500 | Not Available | Negative | 505834 - 506187 | 12501.0 |
| type ii toxin-antitoxin system rele/pare family toxin | DC415_02505 | Not Available | Negative | 506197 - 506448 | 9343.43 |
| gnat family n-acetyltransferase | DC415_02510 | Not Available | Negative | 506494 - 506931 | 15963.2 |
| hypothetical protein | DC415_02515 | Not Available | Negative | 506933 - 509014 | 76008.1 |
| rna-binding protein | DC415_02520 | Not Available | Negative | 509018 - 511825 | 99973.3 |
| duf58 domain-containing protein | DC415_02525 | Not Available | Negative | 511822 - 512742 | 33916.2 |
| moxr family atpase | DC415_02530 | Not Available | Negative | 512791 - 513801 | 36574.3 |
| duf1285 domain-containing protein | DC415_02535 | Not Available | Positive | 514050 - 514673 | 22585.0 |
| coa pyrophosphatase | DC415_02540 | Not Available | Positive | 514670 - 515317 | 24351.9 |
| cca trna nucleotidyltransferase | DC415_02545 | Not Available | Positive | 515314 - 516576 | 45344.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


